Professional interests/research projects:
Development of new experimental and bioinformatic approaches for the study of viral pathogens, primarily pathogens of human infectious diseases. Discovery of new viruses using machine learning and NGS sequencing. Implementation of developed approaches into diagnostic practice.
Creation of new methods for express diagnostics of human infectious diseases, incl. for "non-device" detection.
Creation of new methods for express diagnostics of human infectious diseases, incl. for "non-device" detection.
Main publications:
- Staritzbichler R, Sarti E, Yaklich E, Aleksandrova A, Stamm M, Khafizov K, Forrest LR. Refining pairwise sequence alignments of membrane proteins by the incorporation of anchors. PLoS One. 2021 Apr 30;16(4):e0239881. doi: 10.1371/journal.pone.0239881. PMID: 33930031; PMCID: PMC8087094.
- Kiselev D, Matsvay A, Abramov I, Dedkov V, Shipulin G, Khafizov K. Current Trends in Diagnostics of Viral Infections of Unknown Etiology. Viruses. 2020 Feb 14;12(2):211. doi: 10.3390/v12020211. PMID: 32074965; PMCID: PMC7077230.
- Ayginin AA, Pimkina EV, Matsvay AD, Speranskaya AS, Safonova MV, Blinova EA, Artyushin IV, Dedkov VG, Shipulin GA, Khafizov K. The Study of Viral RNA Diversity in Bird Samples Using De Novo Designed Multiplex Genus-Specific Primer Panels. Adv Virol. 2018 Aug 12;2018:3248285. doi: 10.1155/2018/3248285. PMID: 30158979; PMCID: PMC6109506.
- Ivanov M, Matsvay A, Glazova O, Krasovskiy S, Usacheva M, Amelina E, Chernyak A, Ivanov M, Musienko S, Prodanov T, Kovalenko S, Baranova A, Khafizov K. Targeted sequencing reveals complex, phenotype-correlated genotypes in cystic fibrosis. BMC Med Genomics. 2018 Feb 13;11(Suppl 1):13. doi: 10.1186/s12920-018-0328-z. PMID: 29504914; PMCID: PMC5836842.
- Khafizov K, Madrid-Aliste C, Almo SC, Fiser A. Trends in structural coverage of the protein universe and the impact of the Protein Structure Initiative. Proc Natl Acad Sci U S A. 2014 Mar 11;111(10):3733-8. doi: 10.1073/pnas.1321614111. Epub 2014 Feb 24. Erratum in: Proc Natl Acad Sci U S A. 2014 Apr 1;111(13):E1159. PMID: 24567391; PMCID: PMC3956173.
- Safonova MV, Shchelkanov MY, Khafizov K, Matsvay AD, Ayginin AA, Dolgova AS, Shchelkanov EM, Pimkina EV, Speranskaya AS, Galkina IV, Dedkov VG. Sequencing and genetic characterization of two strains Paramushir virus obtained from the Tyuleniy Island in the Okhotsk Sea (2015). Ticks Tick Borne Dis. 2019 Feb;10(2):269-279. doi: 10.1016/j.ttbdis.2018.11.004. Epub 2018 Nov 12. PMID: 30448254.
- Makenov MT, Toure AH, Bayandin RB, Gladysheva AV, Shipovalov AV, Boumbaly S, Sacko N, Korneev MG, Yakovlev SA, Zhurenkova OB, Grigoreva YE, Fyodorova MV, Radyuk EV, Morozkin ES, Boiro MY, Matsvay A, Khafizov K, Karan LS. Ngari virus (Orthobunyavirus, Peribunyaviridae) in ixodid ticks collected from cattle in Guinea. Acta Trop. 2021 Feb;214:105790. doi: 10.1016/j.actatropica.2020.105790. Epub 2020 Dec 9. PMID: 33309594.
SPIN РИНЦ:
9082-5749
Researcher ID:
E-5368-2011
Scopus Author ID:
26536043300
ORCID:
0000-0001-5524-0296
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